STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Unc80Unc-80 homolog, NALCN channel complex subunit. (3331 aa)    
Predicted Functional Partners:
Nalcn
Sodium leak channel, non-selective.
   
 0.992
Unc79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.991
Fam155a
Family with sequence similarity 155, member A.
    
 
 0.940
Tmem28
Transmembrane protein 28.
    
 
 0.912
Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.854
Scn8a
Sodium channel, voltage-gated, type VIII, alpha.
   
 0.815
Scn2a
Sodium channel, voltage-gated, type II, alpha.
   
 0.810
Scn9a
Sodium voltage-gated channel alpha subunit 9.
    
 0.803
Scn3a
Sodium channel protein type 3 subunit alpha.
    
 0.803
Scn4a
Sodium channel, voltage-gated, type IV, alpha.
    
 0.803
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.