STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TprglTumor protein p63 regulated 1 like. (266 aa)    
Predicted Functional Partners:
Srsf9
Serine and arginine rich splicing factor 9.
   
 0.907
Srsf1
Serine/arginine-rich splicing factor 1.
   
 0.907
ENSPEMP00000020018
annotation not available
   
 0.903
Eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.871
Snrnp70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.839
Snrnp35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.839
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.809
U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2.
   
 0.793
Srsf4
Serine/arginine-rich splicing factor 4.
   
 0.782
Srsf5
Serine and arginine rich splicing factor 5.
   
 0.782
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.