STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tra2bTransformer 2 beta homolog. (288 aa)    
Predicted Functional Partners:
Srsf7
Serine and arginine rich splicing factor 7.
   
 0.998
Srsf1
Serine/arginine-rich splicing factor 1.
   
 0.997
Srsf3
Serine and arginine rich splicing factor 3.
   
 0.995
ENSPEMP00000035806
annotation not available
   
 0.995
Srsf9
Serine and arginine rich splicing factor 9.
   
 0.990
Srsf6
Serine/arginine-rich splicing factor 6.
   
 0.983
ENSPEMP00000025012
annotation not available
   
 0.981
Srsf10
Serine and arginine rich splicing factor 10.
   
0.981
Hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.959
Srsf4
Serine/arginine-rich splicing factor 4.
   
 0.956
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.