STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec14l5SEC14 like lipid binding 5. (696 aa)    
Predicted Functional Partners:
Pld2
Phospholipase D2.
   
 
 0.623
Pld1
Phospholipase D1.
   
 
 0.623
Sumf1
Sulfatase modifying factor 1.
    
 0.619
Ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
 0.617
Pptc7
PTC7 protein phosphatase homolog.
    
   0.598
Ap1g2
Adaptor protein complex AP-1, gamma 2 subunit.
    
 0.565
Ap1g1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.565
Ap4e1
Adaptor-related protein complex AP-4, epsilon 1.
    
 0.559
Clhc1
Clathrin heavy chain linker domain containing 1.
     
 0.555
Cltc
Clathrin heavy chain.
     
 0.555
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.