STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl3060S ribosomal protein L30. (115 aa)    
Predicted Functional Partners:
ENSPEMP00000020095
annotation not available
   
 0.999
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
   
 0.999
ENSPEMP00000034137
annotation not available
   
 0.999
ENSPEMP00000002974
annotation not available
  
 0.997
Rpl8
Ribosomal protein L8.
   
 0.997
Rpl4
Ribosomal protein L4.
  
 0.997
ENSPEMP00000012699
annotation not available
   
 0.997
Rpl26
Ribosomal protein L26.
   
 0.997
ENSPEMP00000023635
annotation not available
  
 0.997
ENSPEMP00000035538
annotation not available
   
 0.997
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.