STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam149bFamily with sequence similarity 149, member B. (605 aa)    
Predicted Functional Partners:
Tbc1d32
TBC1 domain family member 32.
    
 
 0.890
Hal
Histidine ammonia-lyase.
   
    0.812
Gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.808
Hexdc
Hexosaminidase D.
     
 0.803
Cfap20
Cilia and flagella associated protein 20.
    
 
 0.802
Pigm
Phosphatidylinositol glycan anchor biosynthesis class M.
     
 0.797
Naga
alpha-N-acetylgalactosaminidase.
   
 
 0.767
Gla
Galactosidase, alpha.
   
 
 0.767
Pigv
Phosphatidylinositol glycan anchor biosynthesis class V.
    
 0.761
B4galnt1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
     
 0.756
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.