STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zdhhc18Zinc finger, DHHC domain containing 18. (380 aa)    
Predicted Functional Partners:
Golga7b
Golgin A7 family member B.
    
 0.867
Golga7
Golgin A7.
    
 0.867
Sptlc1
Serine palmitoyltransferase long chain base subunit 1.
     
 0.841
Wrn
Werner syndrome RecQ like helicase.
    
 0.735
Acd
Adrenocortical dysplasia.
    
 0.729
Nbn
Nibrin.
    
  0.696
Rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.688
Rbpjl
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.688
Terb1
Telomere repeat binding bouquet formation protein 1.
    
 0.680
Pot1b
Protection of telomeres protein 1-like.
    
 0.675
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.