STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ermp1Endoplasmic reticulum metallopeptidase 1. (899 aa)    
Predicted Functional Partners:
Epor
Erythropoietin receptor.
    
 0.876
Gak
Cyclin G associated kinase.
    
  0.705
Atad1
ATPase family AAA domain containing 1.
     
 0.680
Lep
Leptin.
     
 0.677
Mpl
Myeloproliferative leukemia virus oncogene.
     
 0.670
Atp6v1b2
ATPase H+ transporting V1 subunit B2.
    
 0.662
Atp6ap1
ATPase H+ transporting accessory protein 1.
     
 0.659
ENSPEMP00000012061
annotation not available
     
 0.658
Il7r
Interleukin 7 receptor.
     
 0.655
Sorl1
Sortilin-related receptor, LDLR class A repeats-containing.
     
 0.652
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.