STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPEMP00000027546annotation not available (65 aa)    
Predicted Functional Partners:
Snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.999
Snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.998
ENSPEMP00000007456
annotation not available
   
 0.998
ENSPEMP00000030399
annotation not available
   
 0.998
Snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.998
Lsm10
LSM10, U7 small nuclear RNA associated.
   
 0.998
ENSPEMP00000036168
annotation not available
   
 0.998
ENSPEMP00000031422
annotation not available
   
 0.997
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.997
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.997
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.