STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPEMP00000027609annotation not available (186 aa)    
Predicted Functional Partners:
Urm1
Ubiquitin related modifier 1.
    
 0.998
Nfs1
NFS1 cysteine desulfurase.
   
 0.993
Mocs2
Molybdenum cofactor synthesis 2.
  
 0.985
Lin7b
Lin-7 homolog B, crumbs cell polarity complex component.
    
 0.979
Lin7a
Lin-7 homolog A, crumbs cell polarity complex component.
    
 0.979
Lin7c
Protein lin-7 homolog C.
    
 0.979
Atg3
Autophagy related 3.
    
 0.948
Tst
Thiosulfate sulfurtransferase.
   
 0.943
Mpst
Mercaptopyruvate sulfurtransferase.
   
 0.942
Atg12
Autophagy related 12.
    
 0.941
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.