STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPEMP00000027617annotation not available (199 aa)    
Predicted Functional Partners:
Mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.893
Arid4a
AT-rich interaction domain 4A.
    
 0.816
Arid4b
AT-rich interaction domain 4B.
    
 0.816
Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.797
Glyr1
Glyoxylate reductase 1 homolog.
    
  0.754
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.686
Zp3
Zona pellucida glycoprotein 3.
   
 0.680
Slf1
SMC5-SMC6 complex localization factor 1.
   
 0.675
Ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.670
Tgfb1
Transforming growth factor beta 1.
   
  0.668
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.