STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Brat1BRCA1 associated ATM activator 1. (825 aa)    
Predicted Functional Partners:
Brca1
Breast cancer 1, early onset.
    
 
 0.773
Telo2
Telomere maintenance 2.
   
    0.523
Faap100
FA core complex associated protein 100.
   
    0.523
Lrrc14
Leucine rich repeat containing 14.
   
    0.509
Bard1
BRCA1 associated RING domain 1.
    
 
 0.500
Mcph1
Microcephaly, primary autosomal recessive 1.
    
 
 0.489
Brap
BRCA1 associated protein.
      
 0.483
Inca1
Inhibitor of CDK, cyclin A1 interacting protein 1.
      
 0.457
Tonsl
Tonsoku like, DNA repair protein.
      
 0.452
Mysm1
Myb like, SWIRM and MPN domains 1.
    
   0.424
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.