STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102923362Lysozyme C-2-like. (148 aa)    
Predicted Functional Partners:
Lyzl1
Lysozyme-like protein 1.
  
  
 
0.708
B4galt1
Beta-1,4-galactosyltransferase 1.
    
 0.670
B4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
    
 0.654
B4galt4
Beta-1,4-galactosyltransferase 4.
    
 0.646
B4galt3
Beta-1,4-galactosyltransferase 3.
    
 0.646
ENSPEMP00000000308
annotation not available
    
 0.642
B4galt6
Beta-1,4-galactosyltransferase 6.
    
 0.642
Hcls1
Hematopoietic cell-specific Lyn substrate 1.
   
 0.625
Apob
Apolipoprotein B.
    
 0.625
Gale
UDP-galactose-4-epimerase.
     
 0.620
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.