STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gabrb3Gamma-aminobutyric acid type A receptor beta3 subunit. (495 aa)    
Predicted Functional Partners:
Gabra1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
  
0.993
Gabrg2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
  
0.992
Gabra4
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4.
  
0.987
Gabrd
Gamma-aminobutyric acid type A receptor delta subunit.
  
0.986
Gabrg1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
  
0.985
Gabrg3
Gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3.
  
0.985
Gabra6
Gamma-aminobutyric acid type A receptor alpha6 subunit.
  
0.979
Gabra2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
  
0.978
Gabra5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
  
0.975
Gabra3
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3.
  
0.973
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.