STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DmwdDystrophia myotonica-containing WD repeat motif. (667 aa)    
Predicted Functional Partners:
Wdr48
WD repeat domain 48.
    
 0.983
Usp12
Ubiquitin specific peptidase 12.
    
 0.977
Usp46
Ubiquitin specific peptidase 46.
    
 0.973
Usp38
Ubiquitin specific peptidase 38.
    
 0.935
Usp1
Ubiquitin specific peptidase 1.
    
 0.935
Usp35
Ubiquitin specific peptidase 35.
    
 0.935
Mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.868
Taf9b
TATA-box binding protein associated factor 9B.
    
 0.861
Taf12
TATA-box binding protein associated factor 12.
    
 0.860
Ift140
Intraflagellar transport 140.
    
 0.855
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.