STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dlx2Distal-less homeobox 2. (336 aa)    
Predicted Functional Partners:
Dlx1
Distal-less homeobox 1.
   
 
0.884
Tbr1
T-box brain transcription factor 1.
   
 
 0.644
Runx2
Runt related transcription factor 2.
   
 
 0.644
Lef1
Lymphoid enhancer binding factor 1.
    
 0.607
Irx1
Iroquois homeobox 1.
    
 
 0.606
Runx3
Runt related transcription factor 3.
   
 
 0.583
Meis2
Meis homeobox 2.
    
 
 0.568
Irx2
Iroquois homeobox 2.
   
 
 0.559
Irx5
Iroquois homeobox 5.
   
 
 0.556
Runx1
Runt related transcription factor 1.
   
 
 0.510
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.