STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RabifRAB interacting factor. (123 aa)    
Predicted Functional Partners:
Rab8a
RAB8A, member RAS oncogene family.
    
 
 0.977
Rab8b
RAB8B, member RAS oncogene family.
    
 
 0.929
Rab1a
RAB1A, member RAS oncogene family.
    
 
 0.824
ENSPEMP00000008113
annotation not available
    
 
 0.824
Rab1b
RAB1B, member RAS oncogene family.
    
 
 0.824
Rabl6
RAB, member RAS oncogene family-like 6.
    
 
 0.811
Rab43
RAB43, member RAS oncogene family.
    
 
 0.811
Rab19
RAB19, member RAS oncogene family.
    
 
 0.811
Rab33a
RAB33A, member RAS oncogene family.
    
 
 0.811
Filip1l
Filamin A interacting protein 1-like.
    
 
 0.811
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.