STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPEMP00000033060annotation not available (385 aa)    
Predicted Functional Partners:
Ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.759
Rps27a
Ribosomal protein S27a.
    
  0.731
ENSPEMP00000017817
annotation not available
    
  0.731
Icos
Inducible T cell costimulator.
    
 0.706
Fbxl19
F-box and leucine rich repeat protein 19.
    
  0.689
Kdm2b
Lysine demethylase 2B.
    
  0.671
Kdm2a
Lysine demethylase 2A.
    
  0.671
Uba52
KxDL motif containing 1.
    
  0.628
LOC102923670
Ubiquitin.
    
  0.628
Ube2l6
Ubiquitin conjugating enzyme E2 L6.
    
 0.620
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.