Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arid4a | Arid4b | ENSPEMP00000005858 | ENSPEMP00000036963 | AT-rich interaction domain 4A. | AT-rich interaction domain 4B. | 0.769 |
Arid4a | ENSPEMP00000029456 | ENSPEMP00000005858 | ENSPEMP00000029456 | AT-rich interaction domain 4A. | annotation not available | 0.859 |
Arid4a | Hdac2 | ENSPEMP00000005858 | ENSPEMP00000021826 | AT-rich interaction domain 4A. | Histone deacetylase 2. | 0.992 |
Arid4a | Ogt | ENSPEMP00000005858 | ENSPEMP00000011904 | AT-rich interaction domain 4A. | O-linked N-acetylglucosamine (GlcNAc) transferase. | 0.859 |
Arid4a | Tet1 | ENSPEMP00000005858 | ENSPEMP00000009297 | AT-rich interaction domain 4A. | Tet methylcytosine dioxygenase 1. | 0.698 |
Arid4a | Tet2 | ENSPEMP00000005858 | ENSPEMP00000033089 | AT-rich interaction domain 4A. | Tet methylcytosine dioxygenase 2. | 0.698 |
Arid4a | Tet3 | ENSPEMP00000005858 | ENSPEMP00000029928 | AT-rich interaction domain 4A. | Tet methylcytosine dioxygenase 3. | 0.698 |
Arid4b | Arid4a | ENSPEMP00000036963 | ENSPEMP00000005858 | AT-rich interaction domain 4B. | AT-rich interaction domain 4A. | 0.769 |
Arid4b | ENSPEMP00000029456 | ENSPEMP00000036963 | ENSPEMP00000029456 | AT-rich interaction domain 4B. | annotation not available | 0.869 |
Arid4b | Hdac2 | ENSPEMP00000036963 | ENSPEMP00000021826 | AT-rich interaction domain 4B. | Histone deacetylase 2. | 0.995 |
Arid4b | Ogt | ENSPEMP00000036963 | ENSPEMP00000011904 | AT-rich interaction domain 4B. | O-linked N-acetylglucosamine (GlcNAc) transferase. | 0.869 |
Arid4b | Tet1 | ENSPEMP00000036963 | ENSPEMP00000009297 | AT-rich interaction domain 4B. | Tet methylcytosine dioxygenase 1. | 0.740 |
Arid4b | Tet2 | ENSPEMP00000036963 | ENSPEMP00000033089 | AT-rich interaction domain 4B. | Tet methylcytosine dioxygenase 2. | 0.805 |
Arid4b | Tet3 | ENSPEMP00000036963 | ENSPEMP00000029928 | AT-rich interaction domain 4B. | Tet methylcytosine dioxygenase 3. | 0.716 |
Cxxc5 | Tet1 | ENSPEMP00000027814 | ENSPEMP00000009297 | CXXC finger 5. | Tet methylcytosine dioxygenase 1. | 0.774 |
Cxxc5 | Tet2 | ENSPEMP00000027814 | ENSPEMP00000033089 | CXXC finger 5. | Tet methylcytosine dioxygenase 2. | 0.867 |
Cxxc5 | Tet3 | ENSPEMP00000027814 | ENSPEMP00000029928 | CXXC finger 5. | Tet methylcytosine dioxygenase 3. | 0.774 |
ENSPEMP00000005395 | Tet1 | ENSPEMP00000005395 | ENSPEMP00000009297 | annotation not available | Tet methylcytosine dioxygenase 1. | 0.678 |
ENSPEMP00000005395 | Tet2 | ENSPEMP00000005395 | ENSPEMP00000033089 | annotation not available | Tet methylcytosine dioxygenase 2. | 0.678 |
ENSPEMP00000005395 | Tet3 | ENSPEMP00000005395 | ENSPEMP00000029928 | annotation not available | Tet methylcytosine dioxygenase 3. | 0.758 |
page 1 of 4