STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mtmr6Myotubularin related protein 6. (653 aa)    
Predicted Functional Partners:
Mtmr9
Myotubularin related protein 9.
  
0.987
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.906
Mtmr7
Myotubularin related protein 7.
  
 
 
0.895
Fig4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.893
Sacm1l
SAC1 like phosphatidylinositide phosphatase.
     
 0.892
Pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.889
Mtmr4
Myotubularin related protein 4.
    
0.880
Mtmr3
Myotubularin related protein 3.
    
0.877
Mtmr14
Myotubularin related protein 14.
     
 0.868
Inpp4a
Inositol polyphosphate-4-phosphatase type I A.
     
 0.865
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.