STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cysrt1Cysteine rich tail 1. (143 aa)    
Predicted Functional Partners:
Kprp
Keratinocyte proline rich protein.
   
   0.618
ENSPEMP00000005269
annotation not available
   
  
 0.490
Wdr25
WD repeat domain 25.
    
   0.478
Zfp786
Zinc finger protein 786.
    
   0.478
Prkab2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
   0.478
Tmem273
Transmembrane protein 273.
  
     0.438
Lypd3
LY6/PLAUR domain containing 3.
   
    0.438
Crct1
Cysteine rich C-terminal 1.
   
   0.437
ENSPEMP00000012328
annotation not available
    
   0.434
Pllp
Plasmolipin.
    
   0.428
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.