STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPEMP00000035891annotation not available (287 aa)    
Predicted Functional Partners:
Ddb1
Damage specific DNA binding protein 1.
    
 
 0.915
Nthl1
Nth like DNA glycosylase 1.
   
 0.912
Rpa2
Replication protein A2.
   
 
 0.910
ENSPEMP00000021628
annotation not available
    
 
 0.905
ENSPEMP00000021743
annotation not available
    
 
 0.905
Pcna
Proliferating cell nuclear antigen.
  
 
 0.892
ENSPEMP00000032174
annotation not available
    
 
 0.874
Apex1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
  
 0.860
Apex2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
  
 0.838
Snrpb
Small nuclear ribonucleoprotein polypeptides B and B1.
  
 0.824
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.