STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam210bFamily with sequence similarity 210, member B. (190 aa)    
Predicted Functional Partners:
Pum2
Pumilio RNA-binding family member 2.
    
   0.642
Pum1
Pumilio RNA binding family member 1.
    
   0.642
Lmbr1
Limb region 1.
      
 0.557
Chst4
Carbohydrate sulfotransferase 4.
      
 0.534
Dmtn
Dematin actin binding protein.
   
  
 0.514
Fech
Ferrochelatase.
   
  
 0.457
Mkln1
Muskelin 1.
      
 0.446
Terb1
Telomere repeat binding bouquet formation protein 1.
      
 0.426
ENSPEMP00000029195
annotation not available
      
 0.405
Ankle1
Ankyrin repeat and LEM domain containing 1.
      
 0.400
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.