STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cntn5Contactin 5. (1098 aa)    
Predicted Functional Partners:
Ptprg
Protein tyrosine phosphatase, receptor type, G.
    
 0.932
App
Amyloid beta precursor protein.
   
 
 0.922
Nrcam
Neuronal cell adhesion molecule.
   
0.919
Chl1
Cell adhesion molecule L1-like.
   
0.891
L1cam
L1 cell adhesion molecule.
    
0.876
Cntnap4
Contactin associated protein-like 4.
   
 0.873
Nfasc
Neurofascin.
    
0.866
Aplp1
Amyloid beta (A4) precursor-like protein 1.
   
 
 0.849
Aplp2
Amyloid beta (A4) precursor-like protein 2.
   
 
 0.776
Ptprz1
Protein tyrosine phosphatase receptor type Z1.
   
 0.775
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.