STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ApobrApolipoprotein B receptor. (945 aa)    
Predicted Functional Partners:
Apob
Apolipoprotein B.
     
 0.792
Gm10267
Ovomucoid-like.
     
 0.713
Ncoa7
Nuclear receptor coactivator 7.
      
 0.555
Ms4a7
Membrane-spanning 4-domains, subfamily A, member 7.
  
    0.483
Tufm
Tu translation elongation factor, mitochondrial.
      
 0.461
Il31
Interleukin 31.
  
     0.460
Spata32
Spermatogenesis associated 32.
  
     0.451
Myo1f
Myosin IF.
   
  
 0.448
Bpifa2
BPI fold containing family A member 2.
  
     0.417
Tex13c1
TEX13 family member C.
  
     0.408
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.