STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10740129440S ribosomal protein S27-like. (84 aa)    
Predicted Functional Partners:
ENSPEMP00000020095
annotation not available
   
 0.998
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
   
 0.998
ENSPEMP00000034137
annotation not available
   
 0.998
Rps8
Ribosomal protein S8.
   
 0.991
Rps10
Ribosomal protein S10.
   
 0.989
Rpl4
Ribosomal protein L4.
   
 0.980
Rpl14
Ribosomal protein L14.
   
 0.972
ENSPEMP00000015502
annotation not available
   
 0.968
Rps15
Ribosomal protein S15.
   
 0.968
ENSPEMP00000002974
annotation not available
   
 0.967
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.