STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_01075Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)    
Predicted Functional Partners:
CF15_01070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
CF15_01430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.650
CF15_04405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.609
CF15_01850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.607
CF15_01840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.579
CF15_03055
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.577
CF15_01845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.538
mtnP
5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
    
  0.537
rtcB
tRNA-splicing ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RtcB family.
       0.533
CF15_03340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.497
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.