STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_02100Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (164 aa)    
Predicted Functional Partners:
CF15_01765
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
CF15_04405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.963
CF15_07155
succinate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.806
CF15_02105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.804
CF15_01880
Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.776
CF15_01770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. UPF0219 family.
     
 0.747
CF15_00070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.636
CF15_05145
methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.635
CF15_07150
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.611
CF15_07145
acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.610
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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