Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF15_02415Sulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
CF15_02410
Polysulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
CF15_07120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.851
CF15_06840
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.811
CF15_02420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.799
CF15_04445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.746
CF15_01750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.559
CF15_08055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.504
CF15_02405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.478
CF15_04435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.453
CF15_02430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.451
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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