STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_03220Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. (291 aa)    
Predicted Functional Partners:
CF15_04280
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
CF15_08090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.967
surE
Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.964
CF15_06645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.892
CF15_03785
5'-methylthioadenosine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.885
CF15_05610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.600
CF15_00610
Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.554
CF15_03215
DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
    
 0.456
CF15_01620
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.446
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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