CF15_03310 protein (Pyrodictium occultum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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textmining

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co-expression

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[Homology]

Score

CF15_03310

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)

Predicted Functional Partners:

CF15_03320

0.998

CF15_04170

0.919

CF15_04725

0.901

CF15_03315

0.836

CF15_04835

0.580

CF15_03305

0.509

srp19

0.475

CF15_07650

0.439

Your Current Organism:

Pyrodictium occultum

NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CF15_03305	CF15_03310	CF15_03305	CF15_03310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
CF15_03305	CF15_03320	CF15_03305	CF15_03320	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
CF15_03305	srp19	CF15_03305	CF15_03325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	0.474
CF15_03310	CF15_03305	CF15_03310	CF15_03305	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
CF15_03310	CF15_03315	CF15_03310	CF15_03315	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.836
CF15_03310	CF15_03320	CF15_03310	CF15_03320	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
CF15_03310	CF15_04170	CF15_03310	CF15_04170	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
CF15_03310	CF15_04725	CF15_03310	CF15_04725	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
CF15_03310	CF15_04835	CF15_03310	CF15_04835	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tungstate/molybdate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.580
CF15_03310	CF15_07650	CF15_03310	CF15_07650	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
CF15_03310	srp19	CF15_03310	CF15_03325	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	0.475
CF15_03315	CF15_03310	CF15_03315	CF15_03310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
CF15_03315	CF15_03320	CF15_03315	CF15_03320	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
CF15_03315	srp19	CF15_03315	CF15_03325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	0.642
CF15_03320	CF15_03305	CF15_03320	CF15_03305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
CF15_03320	CF15_03310	CF15_03320	CF15_03310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
CF15_03320	CF15_03315	CF15_03320	CF15_03315	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.915
CF15_03320	srp19	CF15_03320	CF15_03325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.	0.642
CF15_04170	CF15_03310	CF15_04170	CF15_03310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
CF15_04725	CF15_03310	CF15_04725	CF15_03310	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901