STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_03450Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)    
Predicted Functional Partners:
CF15_04645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.840
CF15_04675
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.830
dphB
Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
       0.709
CF15_06210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.622
CF15_04640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.588
CF15_03455
Hypothetical protein; Catalyzes the condensation of 4-aminobenzoate (pABA) with 5- phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta- ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P).
       0.529
CF15_04665
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.524
CF15_04655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.512
CF15_04680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.512
CF15_04685
NADH-quinone oxidoreductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the complex I 20 kDa subunit family.
    
 
 0.512
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.