STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_047952-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
CF15_01560
Ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
CF15_04800
Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
CF15_04805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
CF15_04810
Pyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of pyruvate to form acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
CF15_01550
Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
CF15_02010
Hyaluronate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.989
CF15_03295
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
   
 
 0.989
CF15_01280
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.987
CF15_01765
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.987
CF15_06760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.987
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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