STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_06140Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family. (179 aa)    
Predicted Functional Partners:
CF15_01365
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.555
CF15_06135
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
CF15_06125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.545
CF15_05205
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.538
rpl10e
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.529
CF15_06130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
CF15_03850
Cell division control protein Cdc6; Involved in regulation of DNA replication.
  
 
   0.491
CF15_07970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.483
CF15_04285
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
CF15_01620
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.