Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF15_07970Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
CF15_07975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.844
CF15_03360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.817
CF15_07980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.695
CF15_07960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.635
CF15_07070
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 
 0.600
CF15_06140
Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.578
CF15_05205
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.546
CF15_01365
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.545
CF15_00010
TATA box-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.541
CF15_05150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.475
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.