STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745425_00087Unannotated protein. (106 aa)    
Predicted Functional Partners:
GCA_000745425_00820
Unannotated protein.
   
 0.993
GCA_000745425_01626
Unannotated protein.
   
 0.993
GCA_000745425_00919
Unannotated protein.
  
  0.926
GCA_000745425_00921
Unannotated protein.
   
 0.911
GCA_000745425_01898
Unannotated protein.
  
 0.908
GCA_000745425_00292
Unannotated protein.
    
 0.897
GCA_000745425_00920
Unannotated protein.
   
  0.897
GCA_000745425_00162
Unannotated protein.
  
 0.894
GCA_000745425_00926
Unannotated protein.
   
 0.882
GCA_000745425_03257
Unannotated protein.
 
 0.866
Your Current Organism:
Beijerinckia mobilis
NCBI taxonomy Id: 231434
Other names: ATCC 35011, B. mobilis, Beijerinckia mobile, DSM 2326, LMG 3912, LMG:3912, NCCB 50027
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.