STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745425_00819Unannotated protein. (434 aa)    
Predicted Functional Partners:
GCA_000745425_02600
Unannotated protein.
 
 
 0.805
GCA_000745425_00820
Unannotated protein.
 
 
 0.798
GCA_000745425_01353
Unannotated protein.
  
 
  0.751
GCA_000745425_01462
Unannotated protein.
  
    0.710
GCA_000745425_01458
Unannotated protein.
  
   0.709
GCA_000745425_01460
Unannotated protein.
  
    0.703
GCA_000745425_00250
Unannotated protein.
    
 0.684
GCA_000745425_01707
Unannotated protein.
  
 
  0.579
GCA_000745425_03020
Unannotated protein.
  
    0.549
GCA_000745425_00954
Unannotated protein.
  
     0.485
Your Current Organism:
Beijerinckia mobilis
NCBI taxonomy Id: 231434
Other names: ATCC 35011, B. mobilis, Beijerinckia mobile, DSM 2326, LMG 3912, LMG:3912, NCCB 50027
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.