STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745425_03625Unannotated protein. (170 aa)    
Predicted Functional Partners:
GCA_000745425_01674
Unannotated protein.
  
 
  0.931
GCA_000745425_02977
Unannotated protein.
   
  0.884
GCA_000745425_01945
Unannotated protein.
   
 
 0.852
GCA_000745425_03626
Unannotated protein.
       0.773
GCA_000745425_03050
Unannotated protein.
  
 0.742
GCA_000745425_00147
Unannotated protein.
    
 0.691
GCA_000745425_00099
Unannotated protein.
     
 0.675
GCA_000745425_00031
Unannotated protein.
   
 
  0.671
GCA_000745425_01577
Unannotated protein.
   
   0.669
GCA_000745425_02329
Unannotated protein.
   
   0.662
Your Current Organism:
Beijerinckia mobilis
NCBI taxonomy Id: 231434
Other names: ATCC 35011, B. mobilis, Beijerinckia mobile, DSM 2326, LMG 3912, LMG:3912, NCCB 50027
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.