STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST38_g14089Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
EST38_g5039
ZZ-type domain-containing protein.
   
  0.637
EST38_g428
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.556
EST38_g8977
GRIP domain-containing protein.
    
  0.531
EST38_g3902
MPN domain-containing protein.
    
  0.525
EST38_g3735
Uncharacterized protein.
    
  0.513
EST38_g34
Uncharacterized protein.
    
  0.509
EST38_g4149
Uncharacterized protein.
   
  0.504
EST38_g3555
SH3 domain-containing protein.
   
  0.504
EST38_g11716
TPR_REGION domain-containing protein.
    
  0.494
EST38_g6055
Uncharacterized protein.
    
  0.494
Your Current Organism:
Psathyrella aberdarensis
NCBI taxonomy Id: 2316362
Other names: GLM-F116094, Lacrymaria sp. EB-2018, P. aberdarensis, Psathyrella aberdarensis A. Melzer, Kimani & R. Ullrich, 2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.