STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST38_g3498Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
EST38_g11503
Malic enzyme.
  
  
 0.693
EST38_g8168
Malic enzyme.
  
  
 0.693
EST38_g6950
Malic enzyme.
  
  
 0.693
EST38_g1441
Malic enzyme.
  
  
 0.693
EST38_g2947
GP-PDE domain-containing protein.
    
  0.627
EST38_g1369
HPt domain-containing protein.
  
  
 0.446
EST38_g2154
Uncharacterized protein.
  
  
 0.446
EST38_g3659
SPX domain-containing protein.
  
   0.431
EST38_g11079
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
   0.406
Your Current Organism:
Psathyrella aberdarensis
NCBI taxonomy Id: 2316362
Other names: GLM-F116094, Lacrymaria sp. EB-2018, P. aberdarensis, Psathyrella aberdarensis A. Melzer, Kimani & R. Ullrich, 2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.