STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST38_g1771DUF2235 domain-containing protein. (472 aa)    
Predicted Functional Partners:
EST38_g10403
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.698
EST38_g10341
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.643
EST38_g11699
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.602
EST38_g9787
Cytochrome b5 heme-binding domain-containing protein.
    
 0.602
EST38_g3171
Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.602
EST38_g1180
Uncharacterized protein.
    
 0.563
EST38_g10869
Uncharacterized protein.
  
 0.561
EST38_g8672
BUD22 domain-containing protein.
   
 
 0.540
EST38_g1275
Uncharacterized protein.
    
  0.528
EST38_g601
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.528
Your Current Organism:
Psathyrella aberdarensis
NCBI taxonomy Id: 2316362
Other names: GLM-F116094, Lacrymaria sp. EB-2018, P. aberdarensis, Psathyrella aberdarensis A. Melzer, Kimani & R. Ullrich, 2018
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