STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST38_g6493Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
EST38_g3303
Histone H2A; Belongs to the histone H2A family.
   
 
 0.735
EST38_g4733
Importin N-terminal domain-containing protein.
    
 0.649
EST38_g10538
Uncharacterized protein.
    
 0.625
EST38_g626
Uncharacterized protein.
    
 0.625
EST38_g596
SANT_DAMP1_like domain-containing protein.
    
   0.470
EST38_g3966
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
    0.405
Your Current Organism:
Psathyrella aberdarensis
NCBI taxonomy Id: 2316362
Other names: GLM-F116094, Lacrymaria sp. EB-2018, P. aberdarensis, Psathyrella aberdarensis A. Melzer, Kimani & R. Ullrich, 2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.