STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_002224RNase H domain-containing protein. (387 aa)    
Predicted Functional Partners:
CVT26_014930
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.718
CVT26_010876
Uncharacterized protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.638
CVT26_009819
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.619
CVT26_013606
Nudix hydrolase domain-containing protein.
    
  0.619
CVT26_007052
Thymidylat_synt domain-containing protein.
  
 
 0.611
CVT26_013236
Flavoprotein domain-containing protein.
  
 
 0.611
CVT26_002770
Nucleoside diphosphate kinase.
     
 0.572
CVT26_000024
NDK domain-containing protein.
     
 0.572
CVT26_013854
RNase H domain-containing protein.
  
  
  0.563
CVT26_000869
Uncharacterized protein.
   
 
 0.560
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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