Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVT26_000050 | CVT26_002032 | A0A409VGH6 | A0A409VBU7 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.528 |
CVT26_000050 | CVT26_002205 | A0A409VGH6 | A0A409VBH5 | Histone H2B; Belongs to the histone H2B family. | WD_REPEATS_REGION domain-containing protein. | 0.910 |
CVT26_000050 | CVT26_004642 | A0A409VGH6 | A0A409YTP1 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.975 |
CVT26_000050 | CVT26_005771 | A0A409VGH6 | A0A409Y1B6 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.998 |
CVT26_000050 | CVT26_006822 | A0A409VGH6 | A0A409VMX0 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.869 |
CVT26_000050 | CVT26_007343 | A0A409VGH6 | A0A409VPB2 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.724 |
CVT26_000050 | CVT26_009809 | A0A409VGH6 | A0A409YI81 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.520 |
CVT26_000050 | CVT26_010775 | A0A409VGH6 | A0A409VIB1 | Histone H2B; Belongs to the histone H2B family. | Hist_deacetyl domain-containing protein. | 0.731 |
CVT26_002032 | CVT26_000050 | A0A409VBU7 | A0A409VGH6 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.528 |
CVT26_002032 | CVT26_002205 | A0A409VBU7 | A0A409VBH5 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.983 |
CVT26_002032 | CVT26_004642 | A0A409VBU7 | A0A409YTP1 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.562 |
CVT26_002032 | CVT26_005771 | A0A409VBU7 | A0A409Y1B6 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.562 |
CVT26_002032 | CVT26_005997 | A0A409VBU7 | A0A409Y1G0 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.528 |
CVT26_002032 | CVT26_006822 | A0A409VBU7 | A0A409VMX0 | Uncharacterized protein. | Uncharacterized protein. | 0.609 |
CVT26_002032 | CVT26_007343 | A0A409VBU7 | A0A409VPB2 | Uncharacterized protein. | Uncharacterized protein. | 0.719 |
CVT26_002032 | CVT26_010775 | A0A409VBU7 | A0A409VIB1 | Uncharacterized protein. | Hist_deacetyl domain-containing protein. | 0.884 |
CVT26_002205 | CVT26_000050 | A0A409VBH5 | A0A409VGH6 | WD_REPEATS_REGION domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.910 |
CVT26_002205 | CVT26_002032 | A0A409VBH5 | A0A409VBU7 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.983 |
CVT26_002205 | CVT26_004642 | A0A409VBH5 | A0A409YTP1 | WD_REPEATS_REGION domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.972 |
CVT26_002205 | CVT26_005771 | A0A409VBH5 | A0A409Y1B6 | WD_REPEATS_REGION domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
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