STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_013250Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (191 aa)    
Predicted Functional Partners:
CVT26_003414
WD_REPEATS_REGION domain-containing protein.
    
 0.970
CVT26_000208
Nop domain-containing protein.
    
 0.951
CVT26_007041
PRP3 domain-containing protein.
    
 0.944
CVT26_009727
Uncharacterized protein.
    
 0.944
CVT26_008537
RanBD1 domain-containing protein.
 
 
 0.935
CVT26_009803
Uncharacterized protein.
  
 0.915
CVT26_008542
Sm domain-containing protein.
   
 0.901
CVT26_008744
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.889
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.880
CVT26_012154
Sm domain-containing protein.
   
  0.868
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.