CVT26_013937 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_013937

SET domain-containing protein. (405 aa)

Predicted Functional Partners:

CVT26_003283

0.720

CVT26_001229

0.711

CVT26_006307

0.711

CVT26_000988

0.707

CVT26_011994

0.646

CVT26_011725

0.644

CVT26_000431

0.636

CVT26_007409

0.596

CVT26_010342

0.574

CVT26_007185

0.571

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_000431	CVT26_010342	A0A409Y2G8	A0A409W4V2	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.999
CVT26_000431	CVT26_013937	A0A409Y2G8	A0A409VW28	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	SET domain-containing protein.	0.636
CVT26_000988	CVT26_007185	A0A409YLA6	A0A409W096	Uncharacterized protein.	PHD-type domain-containing protein.	0.820
CVT26_000988	CVT26_011725	A0A409YLA6	A0A409W5V4	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.996
CVT26_000988	CVT26_011994	A0A409YLA6	A0A409YHN2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
CVT26_000988	CVT26_013937	A0A409YLA6	A0A409VW28	Uncharacterized protein.	SET domain-containing protein.	0.707
CVT26_001229	CVT26_006307	A0A409WEH2	A0A409Y0M6	Uncharacterized protein.	MINDY_DUB domain-containing protein.	0.784
CVT26_001229	CVT26_013937	A0A409WEH2	A0A409VW28	Uncharacterized protein.	SET domain-containing protein.	0.711
CVT26_003283	CVT26_007409	A0A409Y4V0	A0A409VN36	Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.924
CVT26_003283	CVT26_013937	A0A409Y4V0	A0A409VW28	Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.	SET domain-containing protein.	0.720
CVT26_006307	CVT26_001229	A0A409Y0M6	A0A409WEH2	MINDY_DUB domain-containing protein.	Uncharacterized protein.	0.784
CVT26_006307	CVT26_013937	A0A409Y0M6	A0A409VW28	MINDY_DUB domain-containing protein.	SET domain-containing protein.	0.711
CVT26_007185	CVT26_000988	A0A409W096	A0A409YLA6	PHD-type domain-containing protein.	Uncharacterized protein.	0.820
CVT26_007185	CVT26_011725	A0A409W096	A0A409W5V4	PHD-type domain-containing protein.	B30.2/SPRY domain-containing protein.	0.755
CVT26_007185	CVT26_011994	A0A409W096	A0A409YHN2	PHD-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.824
CVT26_007185	CVT26_013937	A0A409W096	A0A409VW28	PHD-type domain-containing protein.	SET domain-containing protein.	0.571
CVT26_007409	CVT26_003283	A0A409VN36	A0A409Y4V0	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.	0.924
CVT26_007409	CVT26_013937	A0A409VN36	A0A409VW28	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	SET domain-containing protein.	0.596
CVT26_010342	CVT26_000431	A0A409W4V2	A0A409Y2G8	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.999
CVT26_010342	CVT26_013937	A0A409W4V2	A0A409VW28	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	SET domain-containing protein.	0.574