STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_010046TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (1014 aa)    
Predicted Functional Partners:
CVT26_006620
Uncharacterized protein.
   
 0.974
CVT26_011493
Smg4_UPF3 domain-containing protein.
    
 0.968
CVT26_001695
RRM domain-containing protein.
    
 0.951
CVT26_002834
Uncharacterized protein.
    
 0.937
CVT26_006923
Tr-type G domain-containing protein.
    
 0.911
CVT26_008213
Uncharacterized protein.
    
 0.888
CVT26_016068
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.883
CVT26_012737
Nuclear cap-binding protein subunit 2.
    
 0.873
CVT26_001429
eRF1_1 domain-containing protein.
   
 0.869
CVT26_000524
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.856
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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