CVT26_007599 protein (Gymnopilus dilepis) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

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Score

CVT26_007599

WD_REPEATS_REGION domain-containing protein. (338 aa)

Predicted Functional Partners:

CVT26_011994

0.820

CVT26_011725

0.818

CVT26_000988

0.811

CVT26_009755

0.782

CVT26_011352

0.742

CVT26_005771

0.723

CVT26_005237

0.714

CVT26_009904

0.658

CVT26_010123

0.658

CVT26_011671

0.642

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_000988	CVT26_005237	A0A409YLA6	A0A409YVJ0	Uncharacterized protein.	Uncharacterized protein.	0.932
CVT26_000988	CVT26_005771	A0A409YLA6	A0A409Y1B6	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.969
CVT26_000988	CVT26_007599	A0A409YLA6	A0A409VZS8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.811
CVT26_000988	CVT26_010123	A0A409YLA6	A0A409YS73	Uncharacterized protein.	Uncharacterized protein.	0.891
CVT26_000988	CVT26_011725	A0A409YLA6	A0A409W5V4	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.996
CVT26_000988	CVT26_011994	A0A409YLA6	A0A409YHN2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
CVT26_005237	CVT26_000988	A0A409YVJ0	A0A409YLA6	Uncharacterized protein.	Uncharacterized protein.	0.932
CVT26_005237	CVT26_005771	A0A409YVJ0	A0A409Y1B6	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.943
CVT26_005237	CVT26_007599	A0A409YVJ0	A0A409VZS8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.714
CVT26_005237	CVT26_009755	A0A409YVJ0	A0A409VKG8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.490
CVT26_005237	CVT26_010123	A0A409YVJ0	A0A409YS73	Uncharacterized protein.	Uncharacterized protein.	0.847
CVT26_005237	CVT26_011352	A0A409YVJ0	A0A409W8S7	Uncharacterized protein.	NACHT domain-containing protein.	0.495
CVT26_005237	CVT26_011671	A0A409YVJ0	A0A409WCA6	Uncharacterized protein.	HET domain-containing protein.	0.543
CVT26_005237	CVT26_011725	A0A409YVJ0	A0A409W5V4	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.921
CVT26_005237	CVT26_011994	A0A409YVJ0	A0A409YHN2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.947
CVT26_005771	CVT26_000988	A0A409Y1B6	A0A409YLA6	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.969
CVT26_005771	CVT26_005237	A0A409Y1B6	A0A409YVJ0	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.943
CVT26_005771	CVT26_007599	A0A409Y1B6	A0A409VZS8	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	WD_REPEATS_REGION domain-containing protein.	0.723
CVT26_005771	CVT26_009755	A0A409Y1B6	A0A409VKG8	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	TPR_REGION domain-containing protein.	0.629
CVT26_005771	CVT26_010123	A0A409Y1B6	A0A409YS73	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.981

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Network Stats

number of nodes:

11

number of edges:

54

average node degree:

9.82

avg. local clustering coefficient:

0.982

expected number of edges:

15

PPI enrichment p-value:

4.66e-15

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006166

Purine ribonucleoside salvage

2 of 4

2.65

1.0

0.0155

GO:0055086

Nucleobase-containing small molecule metabolic process

5 of 210

1.32

0.89

0.0074

GO:0072522

Purine-containing compound biosynthetic process

3 of 68

1.59

0.85

0.0182

GO:0009168

Purine ribonucleoside monophosphate biosynthetic process

2 of 17

2.02

0.83

0.0280

GO:1901137

Carbohydrate derivative biosynthetic process

4 of 222

1.2

0.72

0.0182

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:13127

Metabolism of nucleotides, and Purine nucleoside catabolic process

7 of 78

1.9

3.59

1.73e-09

CL:13128

Nucleoside monophosphate metabolic process, and Nucleoside-triphosphate diphosphatase activity

5 of 48

1.96

2.75

1.06e-06

CL:13129

Purine ribonucleoside monophosphate biosynthesis, and Adenosine deaminase domain

3 of 24

2.04

1.47

0.0014

CL:13239

Cytidine and deoxycytidylate deaminase zinc-binding region, and Bacterial bifunctional deaminase-reductase, C-terminal

2 of 5

2.55

1.13

0.0088

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00230

Purine metabolism

3 of 98

1.43

0.75

0.0250

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00383

Cytidine and deoxycytidylate deaminase zinc-binding region

2 of 7

2.4

0.76

0.0416

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