CVT26_015031 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_015031

Uncharacterized protein. (403 aa)

Predicted Functional Partners:

CVT26_004665

0.987

CVT26_001890

0.959

CVT26_003702

0.915

CVT26_013183

0.915

CVT26_013064

0.913

CVT26_004294

0.908

CVT26_007407

0.892

CVT26_015838

0.860

CVT26_001163

0.835

CVT26_002871

0.827

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_001163	CVT26_001890	A0A409YUB9	A0A409WAX1	Uncharacterized protein.	Uncharacterized protein.	0.841
CVT26_001163	CVT26_004294	A0A409YUB9	A0A409YVC5	Uncharacterized protein.	Uncharacterized protein.	0.479
CVT26_001163	CVT26_004665	A0A409YUB9	A0A409YJE6	Uncharacterized protein.	J domain-containing protein.	0.881
CVT26_001163	CVT26_013064	A0A409YUB9	A0A409Y4I9	Uncharacterized protein.	Uncharacterized protein.	0.872
CVT26_001163	CVT26_015031	A0A409YUB9	A0A409W441	Uncharacterized protein.	Uncharacterized protein.	0.835
CVT26_001163	CVT26_015838	A0A409YUB9	A0A409WAG1	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.843
CVT26_001890	CVT26_001163	A0A409WAX1	A0A409YUB9	Uncharacterized protein.	Uncharacterized protein.	0.841
CVT26_001890	CVT26_002871	A0A409WAX1	A0A409VT58	Uncharacterized protein.	Protein kinase domain-containing protein.	0.500
CVT26_001890	CVT26_003702	A0A409WAX1	A0A409W233	Uncharacterized protein.	Protein disulfide-isomerase.	0.802
CVT26_001890	CVT26_004294	A0A409WAX1	A0A409YVC5	Uncharacterized protein.	Uncharacterized protein.	0.925
CVT26_001890	CVT26_004665	A0A409WAX1	A0A409YJE6	Uncharacterized protein.	J domain-containing protein.	0.933
CVT26_001890	CVT26_007407	A0A409WAX1	A0A409VN43	Uncharacterized protein.	UBA domain-containing protein.	0.879
CVT26_001890	CVT26_013064	A0A409WAX1	A0A409Y4I9	Uncharacterized protein.	Uncharacterized protein.	0.796
CVT26_001890	CVT26_013183	A0A409WAX1	A0A409YFE3	Uncharacterized protein.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.715
CVT26_001890	CVT26_015031	A0A409WAX1	A0A409W441	Uncharacterized protein.	Uncharacterized protein.	0.959
CVT26_002871	CVT26_001890	A0A409VT58	A0A409WAX1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.500
CVT26_002871	CVT26_003702	A0A409VT58	A0A409W233	Protein kinase domain-containing protein.	Protein disulfide-isomerase.	0.442
CVT26_002871	CVT26_004294	A0A409VT58	A0A409YVC5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.564
CVT26_002871	CVT26_004665	A0A409VT58	A0A409YJE6	Protein kinase domain-containing protein.	J domain-containing protein.	0.529
CVT26_002871	CVT26_007407	A0A409VT58	A0A409VN43	Protein kinase domain-containing protein.	UBA domain-containing protein.	0.425