STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_000697Uncharacterized protein. (1935 aa)    
Predicted Functional Partners:
MED11
Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.936
CVT26_010716
HpcH_HpaI domain-containing protein.
    
 0.877
CVT26_002106
Tudor domain-containing protein.
    
 0.875
CVT26_003467
Bms1-type G domain-containing protein.
    
 0.825
CVT26_009471
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.787
CVT26_002134
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.785
CVT26_013714
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.770
CVT26_000305
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.761
CVT26_007291
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.740
CVT26_000016
Ribosomal_S10 domain-containing protein.
    
 0.738
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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